About Multi-Q

Multi-Q is a fully automated tool for multiplexed iTRAQ-based quantitation in protein profiling , which is designed as a generic platform that can accommodate various input data formats from search engines and mass spectrometer manufacturers. Experiment results demonstrate the high accuracy, full automation, and high-throughput capability of Multi-Q as a large-scale quantitati ve proteomics tool. These features allow rapid interpretation of output from large proteomic datasets without the need for manual validation.

Important Notices

  • User Guide for Data Preparation (pdf)
  • User Guide for Running Multi-Q (pdf)

The recommended system environment is:
  1. Microsoft .NET framework version 2.0.


Lin, W. T.; Hung, W. N.; Yian, Y. H.; Wu, K. P.; Han, C. L.; Chen, Y. R.; Chen, Y. J.; Sung, T. Y.; Hsu, W. L., Multi-Q: A Fully Automated Tool for Multiplexed Protein Quantitation. J Proteome Res 2006, 5, (9), 2328-2338.